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Bachelor of Sciences -> Diploma in Bioinformatics -> 1 year-> 2nd Semester
Biocomputational Methods/ Microarray
Paper 10
Bio Computational Methods & Micro array
UNIT 1 : Bio Perl
1.1 Bioperl program format, basic perl components
functions (operators)
1.2 Data types (operands) statements, getting
data repeating sequence, finding seq length,
pattern finding
1.3 Programmes for sequence analysis
1.4 Programmes for alignment
1.5 Programmes for transcription
1.6 Programmes for translation
UNIT 2 : BIOXML
2.1 Bio XML program format, basic XML components
2.2 Programming & processing
2.3 Application of BIOXML
UNIT 3 : SQL
3.1 Introduction to SQL
3.2 Program format
3.3 Basic SQL components
3.4 SQL commands with examples
UNIT 4 : Java and Bio Java
UNIT 5 : DNA micro array
5.1 Protein micro array
5.2 DNA chip
5.3 RNA chip
5.4 Protein chip
5.5 Preparation of chip
5.6 Application of micro array (MRNA)(CDNA)
Bio computational method / Microarray
Practical
1. Bio Perl
2. Bio XML
3. SQL
4. Bio Java
5. Java
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